HDCA heart datasets

Introduction to the TissUUmaps interactive viewer

Sections grouped per sample

Below are the links to the tissuumaps viewers for the heart datasets. The viewers are available for ISS, Visium, and Single Cell.

Visium ISS Single-Cell
Spatial (38 sections) Unfiltered pciseq (9 sections) All cells
UMAP (17 sections) Filtered pciseq 05 (9 sections) Innervation-related cells subclustering
Spatial (38 sections) + UMAP (17 sections) Cardiomyocytes subclustering
Endothelial cells subclustering
Mesenchymal cells-fibroblasts subclustering